[FIXED] Import multiple excel files into python pandas and concatenate them into one dataframe

Issue

I would like to read several excel files from a directory into pandas and concatenate them into one big dataframe. I have not been able to figure it out though. I need some help with the for loop and building a concatenated dataframe: Here is what I have so far:

import sys
import csv
import glob
import pandas as pd

# get data file names
path =r'C:\DRO\DCL_rawdata_files\excelfiles'
filenames = glob.glob(path + "/*.xlsx")

dfs = []

for df in dfs: 
    xl_file = pd.ExcelFile(filenames)
    df=xl_file.parse('Sheet1')
    dfs.concat(df, ignore_index=True)

Solution

As mentioned in the comments, one error you are making is that you are looping over an empty list.

Here is how I would do it, using an example of having 5 identical Excel files that are appended one after another.

(1) Imports:

import os
import pandas as pd

(2) List files:

path = os.getcwd()
files = os.listdir(path)
files

Output:

['.DS_Store',
 '.ipynb_checkpoints',
 '.localized',
 'Screen Shot 2013-12-28 at 7.15.45 PM.png',
 'test1 2.xls',
 'test1 3.xls',
 'test1 4.xls',
 'test1 5.xls',
 'test1.xls',
 'Untitled0.ipynb',
 'Werewolf Modelling',
 '~$Random Numbers.xlsx']

(3) Pick out 'xls' files:

files_xls = [f for f in files if f[-3:] == 'xls']
files_xls

Output:

['test1 2.xls', 'test1 3.xls', 'test1 4.xls', 'test1 5.xls', 'test1.xls']

(4) Initialize empty dataframe:

df = pd.DataFrame()

(5) Loop over list of files to append to empty dataframe:

for f in files_xls:
    data = pd.read_excel(f, 'Sheet1')
    df = df.append(data)

(6) Enjoy your new dataframe. :-)

df

Output:

  Result  Sample
0      a       1
1      b       2
2      c       3
3      d       4
4      e       5
5      f       6
6      g       7
7      h       8
8      i       9
9      j      10
0      a       1
1      b       2
2      c       3
3      d       4
4      e       5
5      f       6
6      g       7
7      h       8
8      i       9
9      j      10
0      a       1
1      b       2
2      c       3
3      d       4
4      e       5
5      f       6
6      g       7
7      h       8
8      i       9
9      j      10
0      a       1
1      b       2
2      c       3
3      d       4
4      e       5
5      f       6
6      g       7
7      h       8
8      i       9
9      j      10
0      a       1
1      b       2
2      c       3
3      d       4
4      e       5
5      f       6
6      g       7
7      h       8
8      i       9
9      j      10

Answered By - ericmjl